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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
41
candidate regulatory elements
12
accessible chromatin
7
target gene predictions
6
binding sites
5
histone modifications
3
chromatin state
3
eQTL
3
gene expression
1
variant allelic effects
Date released
September, 2022
50
February, 2021
8
June, 2020
8
November, 2021
May, 2021
4
February, 2024
3
August, 2017
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
75
bed bed3+
4
bigWig
3
tsv
Organism
81
Homo sapiens
Biosample type
52
tissue
20
cell line
9
primary cell
Organ
774
epithelium
427
kidney
332
connective tissue
275
brain
200
pancreas
191
vasculature
165
musculature of body
145
heart
141
blood vessel
139
bodily fluid
134
blood
127
embryo
119
intestine
109
liver
103
limb
97
lung
97
skin of body
82
eye
71
large intestine
69
uterus
62
adipose tissue
52
artery
48
stomach
47
bone element
44
extraembryonic component
43
mammary gland
37
lymph node
37
prostate gland
33
penis
29
adrenal gland
26
small intestine
25
gonad
25
ureter
24
esophagus
24
placenta
18
lymphatic vessel
18
spinal cord
16
nerve
16
vein
15
spleen
15
thymus
14
testis
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
lymphoid tissue
9
skeleton
7
mouth
6
breast
5
trachea
4
tongue
4
urinary bladder
4
vagina
3
pituitary gland
1
nose
1
pericardium
Project
73
AMP
8
ENCODE
Genome assembly (visualization)
75
hg19
13
GRCh38
month_released!
May, 2021
September, 2022
BIOSAMPLE
TYPE
81 results
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candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
histone modifications
chromatin state
eQTL
gene expression
variant allelic effects
tissue
large intestine
15
1
1
sigmoid colon
5
1
1
thyroid gland
4
1
1
transverse colon
4
1
1
colonic mucosa
2
1
1
+ See 9 more…
cell line
HT-29
1
1
1
1
RKO
1
1
1
1
SW480
1
1
1
1
HCT-116 cell
1
2
HCT116
1
2
+ See 2 more…
primary cell
colon epithelial cell
3
3
thyroid follicular cell
1
1
1
See all biosamples
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