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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
222
accessible chromatin
151
candidate regulatory elements
136
target gene predictions
95
differential activity
81
chromatin state
50
variant allelic effects
49
binding sites
32
histone modifications
22
eQTL
15
Fine-mapped variants
5
caQTL
Date released
238
February, 2021
211
September, 2022
155
September, 2023
127
November, 2021
79
February, 2024
May, 2021
38
March, 2023
30
August, 2021
28
June, 2020
25
January, 2020
25
March, 2020
25
May, 2020
20
January, 2021
18
February, 2020
16
February, 2023
16
November, 2022
10
May, 2024
7
April, 2020
7
October, 2019
7
October, 2022
6
August, 2018
6
January, 2022
5
August, 2017
4
November, 2019
3
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
May, 2019
Available data
648
bed bed3+
348
tsv
190
bigWig
78
txt
76
bed bed9
14
bigBed narrowPeak
9
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1114
Homo sapiens
Biosample type
830
primary cell
224
tissue
35
cell line
25
in vitro differentiated cells
Organ
925
epithelium
652
kidney
455
brain
452
connective tissue
369
musculature of body
307
lung
283
intestine
266
vasculature
253
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
155
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
803
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
748
hg19
311
GRCh38
2
hg18
month_released!
May, 2021
BIOSAMPLE
TYPE
1114 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
8
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
2
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
3
5
1
2
+ See 151 more…
tissue
adipose tissue
3
2
7
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
coronary artery
1
3
3
2
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
2
3
+ See 30 more…
cell line
EndoC_BH1
1
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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