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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
accessible chromatin
92
candidate regulatory elements
70
target gene predictions
51
chromatin state
46
gene expression
35
binding sites
28
histone modifications
21
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
126
September, 2022
118
February, 2021
53
November, 2021
21
June, 2020
19
February, 2024
17
September, 2023
May, 2021
12
October, 2022
11
August, 2021
11
May, 2020
10
January, 2020
10
May, 2024
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
4
April, 2020
4
January, 2021
4
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
347
bed bed3+
62
tsv
59
bigWig
43
bed bed9
7
txt
2
bigBed bed9
1
bed bed9+
1
bigBed narrowPeak
Organism
477
Homo sapiens
Biosample type
309
primary cell
92
tissue
44
in vitro differentiated cells
31
cell line
1
stem cell
Organ
925
epithelium
652
kidney
455
brain
452
connective tissue
369
musculature of body
307
lung
283
intestine
266
vasculature
253
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
155
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
395
AMP
53
ENCODE
15
KPMP
4
ITG
4
LungMap
4
T1D
2
community
Genome assembly (visualization)
407
hg19
135
GRCh38
2
hg18
month_released!
May, 2021
BIOSAMPLE
TYPE
477 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
3
4
1
2
6
pericyte cell
10
3
10
1
osteoblast
5
2
1
1
2
3
2
fibroblast of lung
6
3
4
2
foreskin fibroblast
1
6
1
1
4
2
+ See 48 more…
tissue
adipose tissue
2
7
7
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
2
6
1
1
1
mesenchymal stem cell
1
3
2
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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