Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
target gene predictions
11
candidate regulatory elements
6
binding sites
6
chromatin state
5
accessible chromatin
4
histone modifications
2
gene expression
1
eQTL
Date released
51
February, 2024
15
February, 2021
15
September, 2022
3
November, 2021
2
January, 2021
2
June, 2020
2
March, 2024
May, 2021
1
January, 2022
1
May, 2020
1
May, 2022
1
October, 2022
Available data
85
bed bed3+
5
bed bed9
3
bigWig
2
tsv
1
bed bed9+
Organism
94
Homo sapiens
Biosample type
64
cell line
18
primary cell
12
tissue
Organ
925
epithelium
652
kidney
455
brain
452
connective tissue
369
musculature of body
307
lung
283
intestine
266
vasculature
253
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
155
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
89
AMP
3
ENCODE
2
T1D
Genome assembly (visualization)
91
hg19
60
GRCh38
month_released!
May, 2021
organ_slims!
urinary bladder
BIOSAMPLE
TYPE
94 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
cell line
HeLa-S3
54
5
1
3
Ishikawa
1
primary cell
megakaryocyte
2
2
stromal cell of bone marrow
1
2
1
Ishikawa
1
1
1
mononuclear cell of bone marrow
2
1
uterine smooth muscle cell
1
1
+ See 2 more…
tissue
uterus
1
3
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
See all biosamples
Download