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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
271
candidate regulatory elements
239
gene expression
226
accessible chromatin
207
target gene predictions
145
chromatin state
92
differential activity
52
binding sites
41
variant allelic effects
40
histone modifications
7
eQTL
2
caQTL
Date released
414
September, 2022
298
February, 2021
155
September, 2023
133
November, 2021
80
February, 2024
May, 2021
42
June, 2020
38
March, 2023
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
March, 2020
8
October, 2022
7
April, 2020
7
August, 2017
6
August, 2018
5
March, 2024
5
October, 2019
4
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
842
bed bed3+
310
tsv
180
bigWig
138
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1322
Homo sapiens
Biosample type
841
primary cell
387
tissue
66
cell line
28
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
1005
AMP
155
KPMP
133
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
983
hg19
335
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
1322 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
8
15
7
2
2
1
1
2
hepatocyte
1
13
8
2
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
3
5
2
1
+ See 154 more…
tissue
small intestine
29
1
16
15
1
placenta
26
1
14
14
1
2
1
large intestine
27
1
13
13
1
sigmoid colon
10
1
6
5
pigmented layer of retina
20
+ See 41 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
EndoC_BH1
1
1
3
1
GM18507
1
1
2
1
1
HCT116
2
3
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
trophoblast cell
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 3 more…
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