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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
237
gene expression
209
accessible chromatin
156
candidate regulatory elements
139
target gene predictions
92
differential activity
78
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
5
eQTL
2
caQTL
Date released
223
September, 2022
218
February, 2021
155
September, 2023
129
November, 2021
76
February, 2024
38
March, 2023
May, 2021
28
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
8
March, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
August, 2017
3
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
618
bed bed3+
308
tsv
177
bigWig
78
txt
74
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1030
Homo sapiens
Biosample type
815
primary cell
159
tissue
28
cell line
28
in vitro differentiated cells
Organ
925
epithelium
652
kidney
455
brain
452
connective tissue
369
musculature of body
307
lung
283
intestine
266
vasculature
253
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
155
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
717
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
695
hg19
272
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
1030 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
8
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
2
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
3
5
2
1
+ See 147 more…
tissue
small intestine
1
29
16
15
1
ovary
1
1
8
5
4
1
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
2
breast epithelium
1
5
2
2
+ See 19 more…
cell line
EndoC_BH1
1
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
olfactory neurosphere cell line
1
1
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
+ See 3 more…
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