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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
target gene predictions
69
candidate regulatory elements
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
52
July, 2026
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
186
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
221
Homo sapiens
Collection Tags
99
EpiMap
52
ENCODE-rE2G
37
ENCODE
17
ChIP-Atlas
6
AMP
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
1
DGA
Biosample type
159
tissue
56
cell line
6
primary cell
Organ
3361
blood
2899
vasculature
2858
blood vessel
2849
bodily fluid
2658
vein
918
epithelium
892
brain
756
kidney
502
connective tissue
484
heart
436
lung
380
musculature of body
352
intestine
291
skin of body
286
pancreas
241
limb
237
liver
221
large intestine
208
embryo
171
extraembryonic component
161
eye
139
adipose tissue
138
stomach
111
muscle organ
106
bone element
102
mammary gland
100
adrenal gland
96
placenta
96
small intestine
92
thymus
91
uterus
86
artery
85
prostate gland
73
ureter
63
gonad
63
penis
62
spleen
61
lymph node
60
__MARKER__
48
esophagus
48
spinal cord
46
thyroid gland
31
ovary
31
testis
25
nerve
24
lymphoid tissue
24
skeleton
21
lymphatic vessel
21
mouth
16
bronchus
14
breast
13
bone marrow
13
urinary bladder
12
tongue
12
vagina
5
trachea
4
nose
3
pituitary gland
1
embryonic structure
1
gallbladder
1
pericardium
Project
215
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
95
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
221 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
27
13
1
1
sigmoid colon
9
10
5
1
transverse colon
8
8
4
1
1
colonic mucosa
4
4
3
1
mucosa of rectum
2
4
3
+ See 9 more…
cell line
HCT116
19
2
1
HT-29
2
2
1
1
1
1
SW480
2
2
1
1
1
1
RKO
1
1
1
1
1
Caco-2
3
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
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