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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 939chromatin state
  • 887accessible chromatin
  • 876candidate regulatory elements
  • 863histone modifications
  • 817binding sites
  • 385target gene predictions
  • 183eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 4sQTL
  • 4variant to gene
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2413February, 2021
  • 846September, 2022
  • 333November, 2021
  • 312February, 2024
  • May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4129bed bed3+
  • 2903tsv
  • 864bed bed9
  • 533bigWig
  • 35bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 7935Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 938ENCODE
  • 833EpiMap
  • 425AMP
  • 402T2DKP
  • 289DGA
  • 177T1D
  • 1744DN
  • 111T2D
  • 110KPMP
  • 101 T2DKP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 51BLUEPRINT
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
Biosample type
  • 4262tissue
  • 1918cell line
  • 1498primary cell
  • 299in vitro differentiated cells
  • 4stem cell
Organ
  • 2827vasculature
  • 2803bodily fluid
  • 2797blood
  • 2783blood vessel
  • 2652vein
  • 574epithelium
  • 332connective tissue
  • 317brain
  • 300kidney
  • 227musculature of body
  • 170intestine
  • 166lung
  • 161heart
  • 156pancreas
  • 146embryo
  • 144limb
  • 129skin of body
  • 113liver
  • 101large intestine
  • 90eye
  • 77extraembryonic component
  • 71uterus
  • 69stomach
  • 67adipose tissue
  • 57artery
  • 57bone element
  • 57mammary gland
  • 49prostate gland
  • 45lymph node
  • 45small intestine
  • 43penis
  • 42adrenal gland
  • 40placenta
  • 38ureter
  • 31gonad
  • 29esophagus
  • 26thymus
  • 25spinal cord
  • 20spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 13lymphoid tissue
  • 13ovary
  • 13thyroid gland
  • 12bronchus
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 7breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
  • 2pituitary gland
Project
  • 7443AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5022hg19
  • 1812GRCh38
  • 4hg18
month_released!
  • May, 2021
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7983 results

search-icontable-tab-icon
Clear Filters
pQTL
chromatin state
accessible chromatin
candidate regulatory elements
histone modifications
binding sites
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
variant to gene
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart215181112
kidney1610152111
stomach1932111
brain182133121
cell line
HeLa-S332151
H1-hESC111237
K5627111216
A549181312
breast cancer cell119
primary cell
endothelial cell153127122
fibroblast1631426
macrophage12339311
common myeloid progenitor, CD34-positive1314
B cell8691
in vitro differentiated cells
neural progenitor cell4101151
hematopoietic multipotent progenitor cell101911
adipocyte64211
T-cell acute lymphoblastic leukemia53
neuroblastoma cell line62
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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