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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 425ChIP-seq
Assay category
  • 425DNA binding
Target of assay
  • 877histone modification
  • 876histone
  • 498transcription factor
  • 450narrow histone mark
  • 425broad histone mark
  • 334control
  • 109RNA binding protein
  • 89recombinant protein
  • 36chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 109August, 2017
  • May, 2021
  • 58May, 2019
  • 55October, 2019
  • 50November, 2017
  • 37April, 2019
  • 20May, 2024
  • 19October, 2018
  • 17September, 2018
  • 15December, 2017
  • 10October, 2017
  • 9August, 2021
  • 8February, 2018
  • 8June, 2019
  • 6November, 2019
  • 4January, 2019
Available data
  • 363bigWig
  • 356bed narrowPeak
  • 334bam
  • 242bigBed narrowPeak
  • 118fastq
  • 103tagAlign
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 421Homo sapiens
Biosample type
  • 303tissue
  • 56primary cell
  • 46in vitro differentiated cells
  • 19cell line
  • 1stem cell
Organ
  • 78pancreas
  • 70brain
  • 57heart
  • 45blood vessel
  • 45vasculature
  • 44connective tissue
  • 44epithelium
  • 42liver
  • 34limb
  • 20adipose tissue
  • 20musculature of body
  • 16nerve
  • 15kidney
  • 14artery
  • 9vein
  • 4embryo
  • 4spleen
Project
  • 425AMP
Genome assembly (visualization)
  • 348GRCh38
  • 307hg19
Lab
  • 404AMP-T2D consortium
  • 20Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 14inconsistent ontology term
Audit category:
  • 25missing controlled_by
Audit category:
  • 15inconsistent control read length
  • 2inconsistent assembly
month_released!
  • May, 2021
BIOSAMPLE
ASSAY

425 results

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Clear Filters
ChIP-seq
tissue
liver22
left cardiac atrium20
subcutaneous abdominal adipose tissue20
tibial nerve16
heart left ventricle15
primary cell
pancreatic endocrine cell11
endothelial cell of umbilical vein9
pancreatic ductal cell6
skeletal muscle myoblast6
mesenchymal stem cell4
in vitro differentiated cells
adipocyte20
hepatocyte7
neural progenitor cell7
pancreatic endoderm4
definitive endodermal cell2
cell line
HepG29
EndoC_BH16
Panc14
stem cell
hESC1
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