Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Embedding Matrix

Click or enter search terms to filter the experiments included in the matrix.

Embeddings type
  • 9Gene expression
  • 7Accessible chromatin
Date released
  • May, 2022
  • 2August, 2021
  • 2July, 2025
  • 2October, 2024
  • 2September, 2021
  • 1February, 2021
  • 1February, 2023
  • 1June, 2025
  • 1March, 2023
  • 1March, 2024
  • 1November, 2021
  • 1September, 2020
  • 1September, 2023
Available data
  • 12h5ad
  • 4mtx
  • 4rds
  • 2tsv
Organism
  • 12Homo sapiens
Biosample type
  • 15tissue
  • 2primary cell
Organ
  • 7pancreas
  • 2blood
  • 2bodily fluid
  • 2heart
  • 2lung
  • 2musculature of body
  • 1kidney
Project
  • 9AMP
  • 2LungMap
  • 2T1D
  • 2community
  • 1ENCODE
Encyclopedia version
  • 1fusion_consented.snatac.h5ad
  • 1fusion_consented.snrna_post_decontx.h5ad
month_released!
  • May, 2022
organ_slims!!
  • musculature of body
BIOSAMPLE
TYPE

16 results

search-icontable-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans24
heart3
pancreas21
lung11
peripheral blood mononuclear cell11
skeletal muscle11
kidney1
primary cell
islet of Langerhans11
pancreas11
peripheral blood mononuclear cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego