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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 77ChIP-seq
Assay category
  • 77DNA binding
Target of assay
  • 929histone modification
  • 928histone
  • 476narrow histone mark
  • 451broad histone mark
  • 272control
  • 270transcription factor
  • 77RNA binding protein
  • 23recombinant protein
  • 21chromatin remodeller
  • 5nucleotide modification
  • 3other context
  • 3other post-translational modification
Date released
  • November, 2017
  • 21November, 2018
  • 11October, 2018
  • 8August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4June, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 71bigWig
  • 70bed narrowPeak
  • 66bam
  • 58bigBed narrowPeak
  • 52fastq
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
Organism
  • 77Homo sapiens
Biosample type
  • 31cell line
  • 28tissue
  • 11in vitro differentiated cells
  • 7primary cell
Organ
  • 24liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 9pancreas
  • 6epithelium
  • 5adipose tissue
  • 3blood vessel
  • 3kidney
  • 3vasculature
  • 1artery
  • 1eye
Project
  • 77AMP
Genome assembly (visualization)
  • 69GRCh38
  • 66hg19
Lab
  • 66AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 1missing controlled_by
Audit category:
  • 1inconsistent control read length
  • 1inconsistent control run_type
month_released!
  • November, 2017
BIOSAMPLE
ASSAY

77 results

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Clear Filters
ChIP-seq
cell line
HepG220
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
primary cell
skeletal muscle myoblast2
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
kidney epithelial cell1
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