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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
50
candidate regulatory elements
38
accessible chromatin
37
target gene predictions
32
chromatin state
28
gene expression
21
binding sites
20
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
88
September, 2022
62
February, 2021
29
February, 2024
10
August, 2021
10
June, 2020
10
March, 2020
6
November, 2021
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
2
May, 2024
2
October, 2022
1
January, 2022
1
July, 2020
November, 2019
1
September, 2018
Available data
172
bed bed3+
32
bigWig
32
tsv
28
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
246
Homo sapiens
Biosample type
81
cell line
79
primary cell
79
tissue
7
in vitro differentiated cells
Organ
958
epithelium
652
kidney
468
connective tissue
465
brain
375
musculature of body
311
lung
289
intestine
275
pancreas
266
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
238
AMP
6
ENCODE
2
T1D
Genome assembly (visualization)
210
hg19
84
GRCh38
2
hg18
month_released!
November, 2019
BIOSAMPLE
TYPE
246 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HepG2
2
2
3
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 10 more…
primary cell
hepatocyte
2
8
3
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
3
1
1
1
1
1
megakaryocyte
2
2
pancreatic endothelial cell
1
3
+ See 6 more…
tissue
liver
13
3
10
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
arm bone
1
1
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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