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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
Assay category
83
DNA binding
Target of assay
83
histone
83
histone modification
45
narrow histone mark
38
broad histone mark
28
control
8
transcription factor
7
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
21
October, 2019
21
September, 2018
14
August, 2017
14
December, 2017
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
83
bam
80
bigWig
78
bed narrowPeak
51
fastq
29
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
83
Homo sapiens
Biosample type
66
primary cell
15
in vitro differentiated cells
2
cell line
Organ
187
brain
141
pancreas
103
liver
97
heart
83
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
lymph node
1
pituitary gland
Project
81
AMP
2
T1D
Genome assembly (visualization)
80
hg19
78
GRCh38
Lab
83
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
month_released!
November, 2019
organ_slims!
lymph node
spinal cord
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
2
See all biosamples
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