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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
222
gene expression
156
accessible chromatin
94
candidate regulatory elements
90
target gene predictions
65
differential activity
48
chromatin state
38
binding sites
31
variant allelic effects
24
histone modifications
3
eQTL
2
caQTL
Date released
181
February, 2021
155
September, 2023
141
September, 2022
101
November, 2021
53
February, 2024
23
August, 2021
23
June, 2020
15
November, 2022
12
January, 2020
12
May, 2020
11
February, 2023
9
February, 2020
8
May, 2021
7
April, 2020
5
October, 2022
4
March, 2020
4
March, 2023
2
August, 2017
2
January, 2021
2
March, 2024
2
May, 2022
1
July, 2020
Available data
436
bed bed3+
274
tsv
125
bigWig
78
txt
46
bed bed9
3
csv
1
bigBed narrowPeak
Organism
773
Homo sapiens
Biosample type
678
primary cell
54
tissue
23
in vitro differentiated cells
18
cell line
Organ
948
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
508
AMP
155
KPMP
101
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
483
hg19
190
GRCh38
month_released!
November, 2019
organ_slims!
pancreas
stomach
vein
BIOSAMPLE
TYPE
773 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 129 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
cell line
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
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