Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
candidate regulatory elements
80
accessible chromatin
77
target gene predictions
49
gene expression
47
chromatin state
31
binding sites
25
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
117
September, 2022
108
February, 2021
50
November, 2021
19
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
10
May, 2024
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
327
bed bed3+
65
tsv
55
bigWig
40
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
456
Homo sapiens
Biosample type
287
primary cell
94
tissue
44
in vitro differentiated cells
30
cell line
1
stem cell
Organ
944
epithelium
652
kidney
466
brain
461
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
89
bone element
88
adipose tissue
eye
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
380
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
383
hg19
129
GRCh38
2
hg18
month_released!
November, 2022
organ_slims!
bronchus
eye
nose
BIOSAMPLE
TYPE
456 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
16
4
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
5
2
2
1
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
+ See 43 more…
tissue
adipose tissue
7
1
8
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
3
6
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 6 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download