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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
285
gene expression
253
accessible chromatin
236
candidate regulatory elements
209
target gene predictions
133
chromatin state
94
differential activity
76
histone modifications
59
binding sites
59
variant allelic effects
45
eQTL
42
Fine-mapped variants
2
caQTL
Date released
349
September, 2022
325
February, 2021
158
September, 2023
127
November, 2021
79
February, 2024
52
March, 2020
48
May, 2021
46
June, 2020
45
January, 2020
38
March, 2023
35
May, 2020
32
February, 2020
29
August, 2021
21
January, 2022
20
January, 2021
16
November, 2022
12
February, 2023
11
August, 2017
11
October, 2022
10
May, 2024
7
April, 2020
6
August, 2018
October, 2019
4
May, 2019
3
March, 2024
2
May, 2022
2
November, 2019
2
September, 2018
1
January, 2018
1
July, 2020
Available data
896
bed bed3+
413
tsv
195
bigWig
122
bed bed9
78
txt
14
bigBed narrowPeak
9
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1492
Homo sapiens
Biosample type
847
primary cell
494
tissue
120
cell line
31
in vitro differentiated cells
1
stem cell
Organ
954
epithelium
652
kidney
466
brain
466
connective tissue
374
musculature of body
311
lung
289
intestine
271
pancreas
267
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
202
blood vessel
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1182
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1081
hg19
410
GRCh38
2
hg18
month_released!
October, 2019
BIOSAMPLE
TYPE
1493 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
3
7
1
2
2
1
2
hepatocyte
13
8
2
3
1
4
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 153 more…
tissue
brain
1
2
29
16
18
3
1
1
2
adipose tissue
3
2
7
8
6
1
1
4
caudate nucleus
1
2
5
3
4
1
1
2
3
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
+ See 84 more…
cell line
EndoC_BH1
8
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 21 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 8 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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