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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 44ATAC-seq
  • 11ChIP-seq
  • 2DNase-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 46DNA accessibility
  • 11DNA binding
Target of assay
  • 5transcription factor
  • 4control
  • 2histone
  • 2histone modification
  • 2narrow histone mark
  • 1RNA binding protein
Date released
  • 66February, 2021
  • 35February, 2023
  • October, 2019
  • 5May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
Available data
  • 76bam
  • 64bigWig
  • 58tsv
  • 53bed narrowPeak
  • 6tagAlign
  • 5bigBed narrowPeak
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
Organism
  • 115Homo sapiens
Biosample type
  • 66cell line
  • 47tissue
  • 2primary cell
Organ
  • 928pancreas
  • 784liver
  • 680connective tissue
  • 490adipose tissue
  • 489epithelium
  • 385heart
  • 324kidney
  • 200brain
  • 189vasculature
  • 183blood vessel
  • 159bone element
  • 115artery
  • 96musculature of body
  • 69blood
  • 69bodily fluid
  • 53limb
  • 40eye
  • 37embryo
  • 25spleen
  • 20lung
  • 18ureter
  • 16skeleton
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1nerve
  • 1ovary
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
  • 1vein
Project
  • 115AMP
Genome assembly (visualization)
  • 107GRCh38
  • 72hg19
Lab
  • 115AMP-T2D consortium
month_released!
  • October, 2019
BIOSAMPLE
ASSAY

115 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery5286
tissue
coronary artery13652
pulmonary artery2
tibial artery1
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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