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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 61total RNA-seq
  • 59ChIP-seq
  • 45ATAC-seq
  • 6single cell RNA-seq
  • 5DNase-seq
  • 4Hi-C
  • 2WGBS
  • 1pCHi-C
Assay category
  • 67Transcription
  • 59DNA binding
  • 50DNA accessibility
  • 43D chromatin structure
  • 2DNA methylation
Target of assay
  • 37histone
  • 37histone modification
  • 22broad histone mark
  • 15narrow histone mark
  • 14control
  • 8transcription factor
  • 4RNA binding protein
Date released
  • 66February, 2021
  • 50May, 2019
  • October, 2019
  • 35February, 2023
  • 11July, 2019
  • 6August, 2021
  • 5June, 2019
  • 4March, 2020
  • 3February, 2020
  • 3November, 2017
Available data
  • 134bam
  • 114bigWig
  • 95bed narrowPeak
  • 68tsv
  • 46bigBed narrowPeak
  • 7bed bed3+
  • 7bed broadPeak
  • 7bigBed broadPeak
  • 6tagAlign
  • 3fastq
  • 2bedpe bed3+
  • 2hdf5
  • 2hic
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 183Homo sapiens
Biosample type
  • 107tissue
  • 66cell line
  • 10primary cell
Organ
  • 928pancreas
  • 784liver
  • 680connective tissue
  • 490adipose tissue
  • 489epithelium
  • 385heart
  • 324kidney
  • 200brain
  • 189vasculature
  • 183blood vessel
  • 159bone element
  • 115artery
  • 96musculature of body
  • 69blood
  • 69bodily fluid
  • 53limb
  • 40eye
  • 37embryo
  • 25spleen
  • 20lung
  • 18ureter
  • 16skeleton
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1nerve
  • 1ovary
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
  • 1vein
Project
  • 183AMP
Genome assembly (visualization)
  • 154GRCh38
  • 122hg19
Lab
  • 183AMP-T2D consortium
month_released!
  • October, 2019
BIOSAMPLE
ASSAY

183 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
DNase-seq
Hi-C
WGBS
pCHi-C
tissue
coronary artery15362
aorta1134121
ascending aorta2161
thoracic aorta2161
pulmonary artery2
cell line
smooth muscle cell of the coronary artery5268
primary cell
brain microvascular endothelial cell311
endothelial cell of coronary artery1
endothelial cell of hepatic sinusoid1
endothelial cell of umbilical vein1
kidney capillary endothelial cell1
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