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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
266
gene expression
227
accessible chromatin
150
candidate regulatory elements
144
target gene predictions
94
differential activity
71
chromatin state
50
binding sites
44
variant allelic effects
33
histone modifications
16
eQTL
6
Fine-mapped variants
1
caQTL
Date released
246
February, 2021
199
September, 2022
155
September, 2023
127
November, 2021
78
February, 2024
38
March, 2023
38
May, 2021
34
June, 2020
29
August, 2021
20
January, 2021
18
January, 2020
18
May, 2020
16
November, 2022
14
February, 2020
14
March, 2020
12
February, 2023
10
May, 2024
October, 2022
7
April, 2020
6
August, 2018
5
August, 2017
5
October, 2019
3
January, 2022
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
652
bed bed3+
346
tsv
181
bigWig
78
txt
66
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1102
Homo sapiens
Biosample type
824
primary cell
145
tissue
106
cell line
27
in vitro differentiated cells
Organ
953
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
265
vasculature
257
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
157
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
791
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
733
hg19
275
GRCh38
2
hg18
month_released!
October, 2022
BIOSAMPLE
TYPE
1102 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
1
hepatocyte
13
8
2
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
1
+ See 147 more…
tissue
adipose tissue
3
2
7
8
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
5
2
2
2
3
breast epithelium
1
5
3
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
3
1
MM.1S
1
2
2
1
1
1
GM12864
1
2
1
1
1
1
GM12865
1
2
1
1
1
1
GM10248
1
2
1
1
1
+ See 23 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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