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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
candidate regulatory elements
251
gene expression
159
target gene predictions
139
accessible chromatin
129
chromatin state
70
differential activity
32
variant allelic effects
31
histone modifications
26
eQTL
25
binding sites
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
357
September, 2022
301
February, 2021
157
September, 2023
53
November, 2021
38
August, 2021
36
June, 2020
29
May, 2020
24
January, 2020
19
February, 2024
18
February, 2020
17
May, 2021
October, 2022
13
March, 2020
10
May, 2024
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
648
bed bed3+
316
tsv
122
bed bed9
93
txt
91
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1126
Homo sapiens
Biosample type
586
primary cell
417
tissue
71
cell line
51
in vitro differentiated cells
1
stem cell
Organ
953
epithelium
650
kidney
460
brain
456
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
265
vasculature
257
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
157
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
907
AMP
155
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
787
hg19
240
GRCh38
2
hg18
month_released!
October, 2022
BIOSAMPLE
TYPE
1126 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
histone modifications
eQTL
binding sites
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
3
4
16
6
2
pericyte cell
3
10
10
1
epithelial cell of proximal tubule
2
16
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
osteoblast
2
2
2
5
1
2
2
+ See 111 more…
tissue
kidney
29
7
14
10
16
1
2
1
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 27 more…
cell line
HEK293
3
1
1
1
1
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
1
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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