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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
gene expression
227
accessible chromatin
142
target gene predictions
124
candidate regulatory elements
98
differential activity
70
chromatin state
45
variant allelic effects
41
binding sites
31
histone modifications
18
eQTL
5
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
219
February, 2021
191
September, 2022
155
September, 2023
127
November, 2021
80
February, 2024
51
March, 2023
42
May, 2021
31
August, 2021
28
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
15
November, 2022
14
March, 2020
12
February, 2023
11
February, 2020
7
April, 2020
7
August, 2018
6
August, 2017
6
October, 2019
October, 2022
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
616
bed bed3+
350
tsv
187
bigWig
78
txt
63
bed bed9
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1076
Homo sapiens
Biosample type
828
primary cell
168
tissue
54
cell line
26
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
763
AMP
155
KPMP
127
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
694
hg19
264
GRCh38
month_released!
October, 2022
organ_slims!
limb
placenta
BIOSAMPLE
TYPE
1076 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
sQTL
variant to gene
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
1
+ See 151 more…
tissue
islet of Langerhans
11
6
1
3
1
2
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
endocrine pancreas
4
7
4
+ See 20 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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