Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 253gene expression
  • 212accessible chromatin
  • 122target gene predictions
  • 109candidate regulatory elements
  • 92differential activity
  • 53chromatin state
  • 41variant allelic effects
  • 38binding sites
  • 28histone modifications
  • 3eQTL
  • 1caQTL
Date released
  • 196February, 2021
  • 155September, 2023
  • 151September, 2022
  • 127November, 2021
  • 76February, 2024
  • 38March, 2023
  • 34May, 2021
  • 25June, 2020
  • 23August, 2021
  • 20January, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 9May, 2024
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • October, 2022
  • 5October, 2019
  • 3August, 2017
  • 2March, 2024
  • 2May, 2022
  • 1July, 2020
  • 1November, 2019
Available data
  • 551bed bed3+
  • 324tsv
  • 176bigWig
  • 78txt
  • 50bed bed9
  • 14bigBed narrowPeak
  • 6csv
  • 3bam
  • 3bed gappedPeak
  • 3xls
  • 2bigBed bed9
Organism
  • 952Homo sapiens
Collection Tags
  • 200DGA
  • 159AMP
  • 155KPMP
  • 148T2DKP
  • 144EpiMap
  • 81ChIP-Atlas
  • 58ENCODE
  • 47 T2DKP
  • 44HPAP
  • 35T1D
  • 30CMDGA
  • 6FNIH_projects-heart
  • 4T2D
  • 3FNIH_projects-liver
  • 2GTEx
Biosample type
  • 822primary cell
  • 61tissue
  • 43cell line
  • 26in vitro differentiated cells
Organ
  • 2909vasculature
  • 2846blood vessel
  • 2840bodily fluid
  • 2829blood
  • 2657vein
  • 952epithelium
  • 650kidney
  • 468connective tissue
  • 461brain
  • 377musculature of body
  • 307lung
  • 288intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 214embryo
  • 200skin of body
  • 173large intestine
  • 162liver
  • 145extraembryonic component
  • 119stomach
  • 107eye
  • 99adipose tissue
  • 88bone element
  • 84mammary gland
  • 84small intestine
  • 82uterus
  • 78artery
  • 78prostate gland
  • 73adrenal gland
  • 72placenta
  • 64ureter
  • 62penis
  • 60lymph node
  • 49gonad
  • 49thymus
  • 45esophagus
  • 42spinal cord
  • 34spleen
  • 25nerve
  • 25testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 641AMP
  • 155KPMP
  • 127ENCODE
  • 20T1D
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 603hg19
  • 243GRCh38
month_released!
  • October, 2022
BIOSAMPLE
TYPE

952 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell9157322111
hepatocyte138321214
epithelial cell of proximal tubule1611211
glomerular endothelial cell1421211
endothelial cell of umbilical vein246511
tissue
pigmented layer of retina20
breast epithelium1352
esophagus squamous epithelium1262
kidney epithelium11
pancreatic ductal cell2
cell line
EndoC_BH188131
keratinocyte31
choroid plexus epithelial cell111
colon epithelial cell111
epithelial cell of prostate111
in vitro differentiated cells
retinal pigment epithelial cell6
hepatocyte121
foreskin keratinocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego