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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
candidate regulatory elements
81
target gene predictions
62
chromatin state
23
accessible chromatin
7
binding sites
7
histone modifications
6
eQTL
5
gene expression
2
variant allelic effects
Date released
179
September, 2022
80
February, 2021
17
November, 2021
14
June, 2020
8
May, 2021
6
January, 2022
5
February, 2024
5
March, 2024
3
March, 2020
2
August, 2017
October, 2022
Available data
248
bed bed3+
60
bed bed9
9
bigWig
5
tsv
Organism
319
Homo sapiens
Biosample type
259
tissue
39
cell line
21
primary cell
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
302
AMP
17
ENCODE
Genome assembly (visualization)
308
hg19
85
GRCh38
month_released!
October, 2022
organ_slims!
musculature of body
BIOSAMPLE
TYPE
319 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
stomach
40
21
19
3
1
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
ovary
8
6
4
1
1
1
transverse colon
8
5
4
1
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
1
RKO
1
1
1
1
+ See 5 more…
primary cell
colon epithelial cell
3
3
parietal cell
1
1
1
peptic cell
1
1
1
foveolar cell of stomach
1
1
luteal cell
1
1
+ See 4 more…
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