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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
23
gene expression
21
accessible chromatin
20
target gene predictions
16
chromatin state
12
histone modifications
11
binding sites
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
29
February, 2024
22
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
May, 2024
1
November, 2019
October, 2022
1
September, 2018
Available data
93
bed bed3+
27
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
145
Homo sapiens
Biosample type
58
tissue
55
primary cell
25
cell line
7
in vitro differentiated cells
Organ
953
epithelium
650
kidney
460
brain
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
265
vasculature
257
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
157
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphatic vessel
24
lymphoid tissue
23
ovary
thyroid gland
22
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
141
AMP
4
ENCODE
Genome assembly (visualization)
115
hg19
58
GRCh38
2
hg18
month_released!
October, 2022
organ_slims!
connective tissue
thyroid gland
BIOSAMPLE
TYPE
145 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
1
4
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
2
13
8
3
1
4
1
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
5
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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