Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 131candidate regulatory elements
  • 78target gene predictions
  • 71chromatin state
  • 15accessible chromatin
  • 5binding sites
  • 4histone modifications
  • 1eQTL
  • 1gene expression
  • 1variant allelic effects
Date released
  • 210September, 2022
  • 70February, 2021
  • 9November, 2021
  • 6June, 2020
  • 4May, 2021
  • October, 2022
  • 3April, 2020
  • 1August, 2017
  • 1February, 2024
  • 1January, 2022
  • 1March, 2020
  • 1March, 2024
Available data
  • 236bed bed3+
  • 70bed bed9
  • 9bigWig
  • 1tsv
Organism
  • 307Homo sapiens
Collection Tags
  • 210EpiMap
  • 61ENCODE
  • 15ChIP-Atlas
  • 9AMP
  • 9T2DKP
  • 6DGA
  • 1GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 181tissue
  • 94cell line
  • 32primary cell
Organ
  • 2909vasculature
  • 2846blood vessel
  • 2840bodily fluid
  • 2829blood
  • 2657vein
  • 952epithelium
  • 650kidney
  • 468connective tissue
  • 461brain
  • 377musculature of body
  • 307lung
  • 288intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 214embryo
  • 200skin of body
  • 173large intestine
  • 162liver
  • 145extraembryonic component
  • 119stomach
  • 107eye
  • 99adipose tissue
  • 88bone element
  • 84mammary gland
  • 84small intestine
  • 82uterus
  • 78artery
  • 78prostate gland
  • 73adrenal gland
  • 72placenta
  • 64ureter
  • 62penis
  • 60lymph node
  • 49gonad
  • 49thymus
  • 45esophagus
  • 42spinal cord
  • 34spleen
  • 25nerve
  • 25testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 295AMP
  • 9ENCODE
  • 3LungMap
Genome assembly (visualization)
  • 305hg19
  • 80GRCh38
month_released!
  • October, 2022
BIOSAMPLE
TYPE

307 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
lung33171611
left lung261313
right lung2211111
upper lobe of left lung733111
cell line
A549211918111
IMR-90221111
PC-9221111
WI38511
NCI-H226 cell1111
primary cell
fibroblast of lung644
type II pneumocyte241
lung microvascular endothelial cell311
type I pneumocyte13
endothelial cell of artery1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego