Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
candidate regulatory elements
32
target gene predictions
27
chromatin state
24
accessible chromatin
20
gene expression
13
eQTL
12
binding sites
8
histone modifications
6
Fine-mapped variants
4
differential activity
3
variant allelic effects
Date released
72
September, 2022
64
February, 2021
8
March, 2020
7
June, 2020
6
August, 2021
5
February, 2020
5
September, 2023
4
January, 2020
4
May, 2020
4
November, 2021
3
January, 2022
3
May, 2021
3
May, 2024
2
August, 2017
2
February, 2024
2
January, 2021
September, 2018
1
April, 2020
1
January, 2018
1
May, 2022
1
November, 2022
1
October, 2022
Available data
134
bed bed3+
31
tsv
24
bed bed9
16
bigWig
1
bed bed9+
1
bigBed bed9
Organism
200
Homo sapiens
Biosample type
104
tissue
58
cell line
35
primary cell
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
188
AMP
5
KPMP
4
ENCODE
2
T1D
1
LungMap
Genome assembly (visualization)
171
hg19
52
GRCh38
2
hg18
month_released!
September, 2018
BIOSAMPLE
TYPE
200 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
histone modifications
Fine-mapped variants
differential activity
variant allelic effects
tissue
adipose tissue
7
8
6
2
3
4
1
1
subcutaneous adipose tissue
2
1
1
5
6
3
1
1
omental fat pad
5
2
2
1
2
2
3
subcutaneous abdominal adipose tissue
5
1
bone tissue
4
+ See 15 more…
cell line
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
L1-S8
2
1
1
1
OCI-LY3
2
1
1
1
+ See 9 more…
primary cell
endothelial cell of lymphatic vessel
3
1
3
dermis lymphatic vessel endothelial cell
2
2
2
Lymphatic Endothelial Cell
3
2
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
+ See 6 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
white adipose cell
1
See all biosamples
Download