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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
247
candidate regulatory elements
153
target gene predictions
137
accessible chromatin
125
chromatin state
70
differential activity
40
binding sites
33
histone modifications
32
variant allelic effects
25
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
345
September, 2022
301
February, 2021
157
September, 2023
53
November, 2021
38
August, 2021
36
June, 2020
29
May, 2020
24
January, 2020
19
February, 2024
18
February, 2020
16
May, 2021
14
October, 2022
12
March, 2020
10
May, 2024
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
October, 2019
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
650
bed bed3+
315
tsv
118
bed bed9
93
txt
89
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1122
Homo sapiens
Biosample type
604
primary cell
394
tissue
72
cell line
51
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
903
AMP
155
KPMP
53
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
785
hg19
233
GRCh38
2
hg18
month_released!
September, 2018
BIOSAMPLE
TYPE
1122 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
6
2
pericyte cell
3
10
10
1
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
osteoblast
2
2
2
5
1
3
2
+ See 112 more…
tissue
kidney
7
29
14
10
16
1
2
1
1
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
left kidney
18
9
9
+ See 26 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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