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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
histone modifications
863
accessible chromatin
846
candidate regulatory elements
759
binding sites
658
gene expression
484
target gene predictions
163
differential activity
161
eQTL
136
variant allelic effects
106
chromatin state
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2485
February, 2021
September, 2022
382
May, 2021
328
November, 2021
321
February, 2024
286
September, 2023
272
June, 2020
152
May, 2020
118
March, 2020
116
August, 2021
105
January, 2022
86
January, 2020
81
October, 2022
66
March, 2023
62
February, 2020
56
January, 2021
47
May, 2022
44
November, 2022
39
May, 2024
32
February, 2023
30
August, 2017
29
March, 2024
19
April, 2020
14
October, 2019
13
November, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
2
January, 2018
2
September, 2018
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4069
bed bed3+
871
tsv
511
bigWig
108
txt
39
bigBed bed9
36
bed bed9
34
bed bed9+
21
csv
15
bigBed narrowPeak
Organism
5172
Homo sapiens
Biosample type
1955
primary cell
1669
cell line
1229
tissue
361
in vitro differentiated cells
4
stem cell
Organ
808
epithelium
427
kidney
348
connective tissue
286
brain
233
pancreas
194
vasculature
171
musculature of body
149
heart
144
blood vessel
143
bodily fluid
blood
134
embryo
125
intestine
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
18
lymphatic vessel
17
vein
16
nerve
16
spleen
16
thymus
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4516
AMP
328
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4266
hg19
991
GRCh38
2
hg18
month_released!
September, 2022
organ_slims!
blood
liver
skeleton
BIOSAMPLE
TYPE
5220 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
3
2
9
7
1
2
2
fibroblast
16
3
1
4
2
6
macrophage
12
3
2
3
7
3
1
+ See 436 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
breast cancer cell
11
9
HFFc6
19
+ See 717 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 244 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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