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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 947histone modifications
  • 895accessible chromatin
  • 857candidate regulatory elements
  • 772binding sites
  • 688gene expression
  • 491target gene predictions
  • 185eQTL
  • 172differential activity
  • 141variant allelic effects
  • 109chromatin state
  • 82Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 3pQTL
  • 1representative DNase hypersensitivity sites
Date released
  • 2520February, 2021
  • September, 2022
  • 385May, 2021
  • 350February, 2024
  • 333November, 2021
  • 286September, 2023
  • 277June, 2020
  • 155May, 2020
  • 128March, 2020
  • 126August, 2021
  • 106January, 2022
  • 89January, 2020
  • 82October, 2022
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35March, 2025
  • 33August, 2017
  • 32February, 2023
  • 29March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1July, 2020
  • 1June, 2021
Available data
  • 4269bed bed3+
  • 934tsv
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 5330Homo sapiens
Collection Tags
  • 1785ChIP-Atlas
  • 927ENCODE
  • 641DGA
  • 525AMP
  • 421T1D
  • 404T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 173 T2DKP
  • 150GTEx
  • 1464DN
  • 108T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 40STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1EpiMap
Biosample type
  • 2021primary cell
  • 1684cell line
  • 1302tissue
  • 365in vitro differentiated cells
  • 4stem cell
Organ
  • 2838vasculature
  • 2788blood vessel
  • 2784bodily fluid
  • blood
  • 2652vein
  • 807epithelium
  • 427kidney
  • 360connective tissue
  • 287brain
  • 233pancreas
  • 176musculature of body
  • 149heart
  • 134embryo
  • 125intestine
  • 117liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 76large intestine
  • 75adipose tissue
  • 71uterus
  • 58artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 4667AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4354hg19
  • 1042GRCh38
  • 4hg18
month_released!
  • September, 2022
organ_slims!
  • blood
BIOSAMPLE
TYPE

5378 results

search-icontable-tab-icon
Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte861811524121
CD8-positive, alpha-beta T cell3047351
endothelial cell1153297122
macrophage123239311
fibroblast1631426
cell line
HeLa-S32152
H1-hESC112838
EndoC_BH11818131
breast cancer cell119
HFFc619
tissue
islet of Langerhans1521111313222
kidney2101517112
heart151813122
liver24612392211
retina12331111
in vitro differentiated cells
neural progenitor cell1510171
adipocyte1421144
embryonic stem cell16115
hematopoietic multipotent progenitor cell11911
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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