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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 944histone modifications
  • 816candidate regulatory elements
  • 774binding sites
  • 700accessible chromatin
  • 450target gene predictions
  • 436gene expression
  • 186eQTL
  • 106chromatin state
  • 100variant allelic effects
  • 84Fine-mapped variants
  • 80differential activity
  • 11caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2394February, 2021
  • September, 2022
  • 355May, 2021
  • 302February, 2024
  • 264June, 2020
  • 206November, 2021
  • 140May, 2020
  • 131September, 2023
  • 122March, 2020
  • 106January, 2022
  • 105August, 2021
  • 95October, 2022
  • 75January, 2020
  • 55February, 2020
  • 47May, 2022
  • 38March, 2025
  • 36January, 2021
  • 32August, 2017
  • 32March, 2023
  • 31May, 2024
  • 29November, 2022
  • 28March, 2024
  • 20February, 2023
  • 13November, 2019
  • 12April, 2020
  • 9May, 2019
  • 9October, 2019
  • 8April, 2019
  • 3August, 2018
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 3952bed bed3+
  • 3252tsv
  • 369bigWig
  • 38bigBed bed9
  • 34bed bed9
  • 34bed bed9+
  • 30txt
  • 20csv
  • 2bigBed narrowPeak
  • 1bam
Organism
  • 7302Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1766ChIP-Atlas
  • 903ENCODE
  • 445DGA
  • 386T1D
  • 371AMP
  • 258T2DKP
  • 219BLUEPRINT
  • 1744DN
  • 149GTEx
  • 126 T2DKP
  • 126KPMP
  • 107T2D
  • 101eQTLCatalogue
  • 70CMDGA
  • 43STARNET
  • 23HPAP
  • 20FNIH_projects-heart
  • 12ROADMAP
  • 9FNIH_projects-liver
  • 1EpiMap
Biosample type
  • 3897tissue
  • 1770cell line
  • 1335primary cell
  • 342in vitro differentiated cells
  • 4stem cell
Organ
  • 2838vasculature
  • 2788blood vessel
  • 2784bodily fluid
  • 2779blood
  • 2652vein
  • epithelium
  • 427kidney
  • 360connective tissue
  • 287brain
  • 233pancreas
  • 176musculature of body
  • 149heart
  • 134embryo
  • 125intestine
  • 117liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 76large intestine
  • 75adipose tissue
  • 71uterus
  • 58artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 6950AMP
  • 206ENCODE
  • 126KPMP
  • 40T1D
  • 12LungMap
  • 11community
  • 5ITG
Genome assembly (visualization)
  • 4033hg19
  • 876GRCh38
  • 4hg18
month_released!
  • September, 2022
organ_slims!
  • epithelium
BIOSAMPLE
TYPE

7350 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
target gene predictions
gene expression
eQTL
chromatin state
variant allelic effects
Fine-mapped variants
differential activity
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans1251111331222
kidney2151107121
heart118151322
liver26143292121
cell line
HeLa-S32152
H1-hESC121388
K5621121171
breast cancer cell119
HFFc619
primary cell
monocyte861182154121
CD8-positive, alpha-beta T cell3074531
macrophage312329311
fibroblast3116426
smooth muscle cell2961121
in vitro differentiated cells
neural progenitor cell1511017
adipocyte1214414
embryonic stem cell11615
hematopoietic multipotent progenitor cell19111
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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