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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
957
histone modifications
861
accessible chromatin
802
binding sites
724
candidate regulatory elements
670
gene expression
500
target gene predictions
166
differential activity
162
eQTL
133
variant allelic effects
103
chromatin state
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2440
February, 2021
September, 2022
378
May, 2021
360
February, 2024
316
November, 2021
286
September, 2023
275
June, 2020
150
May, 2020
127
August, 2021
118
March, 2020
103
January, 2022
97
October, 2022
84
January, 2020
70
March, 2023
58
February, 2020
56
January, 2021
46
May, 2022
44
November, 2022
32
February, 2023
30
August, 2017
26
March, 2024
19
April, 2020
14
November, 2019
13
October, 2019
9
August, 2018
8
April, 2019
7
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4016
bed bed3+
884
tsv
515
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
33
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5133
Homo sapiens
Biosample type
1929
primary cell
1780
cell line
1103
tissue
363
in vitro differentiated cells
4
stem cell
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
skeleton
7
breast
7
mouth
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4489
AMP
316
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4206
hg19
986
GRCh38
4
hg18
month_released!
September, 2022
organ_slims!
large intestine
musculature of body
skeleton
trachea
BIOSAMPLE
TYPE
5181 results
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Clear Filters
histone modifications
accessible chromatin
binding sites
candidate regulatory elements
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 430 more…
cell line
HeLa-S3
1
2
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
2
1
17
1
breast cancer cell
11
9
+ See 737 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
1
15
7
1
1
2
heart
1
5
1
18
3
1
2
2
retina
1
23
1
3
1
1
1
stomach
1
3
21
1
2
1
+ See 215 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
1
2
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
1
9
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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