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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
accessible chromatin
110
candidate regulatory elements
61
gene expression
59
target gene predictions
43
binding sites
36
histone modifications
31
eQTL
23
variant allelic effects
16
differential activity
15
Fine-mapped variants
14
chromatin state
4
caQTL
2
pQTL
Date released
September, 2022
201
February, 2021
69
November, 2021
34
June, 2020
25
May, 2021
24
February, 2024
22
September, 2023
20
March, 2020
15
January, 2020
15
May, 2020
14
February, 2020
14
October, 2022
13
January, 2022
11
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
February, 2023
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
November, 2019
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
408
bed bed3+
89
tsv
73
bigWig
7
txt
4
bigBed bed9
3
bed bed9
1
bigBed narrowPeak
Organism
533
Homo sapiens
Biosample type
247
primary cell
196
tissue
51
cell line
38
in vitro differentiated cells
1
stem cell
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
433
AMP
69
ENCODE
20
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
437
hg19
132
GRCh38
2
hg18
month_released!
September, 2022
BIOSAMPLE
TYPE
533 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
1
2
1
3
2
foreskin fibroblast
1
5
1
4
2
pancreatic stellate cell
2
2
1
3
+ See 55 more…
tissue
subcutaneous adipose tissue
2
2
5
6
1
1
3
1
large intestine
1
15
1
1
small intestine
1
14
2
1
coronary artery
3
1
1
1
2
2
3
1
1
adipose tissue
2
1
3
2
1
4
1
+ See 32 more…
cell line
HT-29
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
2
1
4
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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