Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 9accessible chromatin
  • 9gene expression
  • 7Fine-mapped variants
  • 7eQTL
  • 6binding sites
  • 4candidate regulatory elements
  • 4histone modifications
  • 4variant allelic effects
  • 2caQTL
  • 2chromatin state
  • 2differential activity
  • 2target gene predictions
Date released
  • September, 2022
  • 15February, 2021
  • 6March, 2020
  • 5May, 2020
  • 5September, 2023
  • 4February, 2020
  • 4January, 2020
  • 4March, 2025
  • 3February, 2023
  • 3January, 2022
  • 3June, 2020
  • 2May, 2021
  • 2November, 2019
  • 1May, 2019
  • 1October, 2022
Available data
  • 34bed bed3+
  • 20tsv
  • 7bigWig
  • 2bed bed9
  • 2bigBed bed9
Organism
  • 58Homo sapiens
Collection Tags
  • 12ChIP-Atlas
  • 10GTEx
  • 8ENCODE
  • 7DGA
  • 5KPMP
  • 4STARNET
  • 3CMDGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
Biosample type
  • 34tissue
  • 20primary cell
  • 4cell line
Organ
  • 2838vasculature
  • 2788blood vessel
  • 2784bodily fluid
  • 2779blood
  • 2652vein
  • 807epithelium
  • 427kidney
  • 360connective tissue
  • 287brain
  • 233pancreas
  • 176musculature of body
  • 149heart
  • 134embryo
  • 125intestine
  • 117liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 76large intestine
  • 75adipose tissue
  • 71uterus
  • 58artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 53AMP
  • 5KPMP
Genome assembly (visualization)
  • 39hg19
  • 21GRCh38
month_released!
  • September, 2022
BIOSAMPLE
TYPE

58 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
gene expression
Fine-mapped variants
eQTL
binding sites
candidate regulatory elements
histone modifications
variant allelic effects
caQTL
chromatin state
differential activity
target gene predictions
tissue
coronary artery313212111
tibial artery3132121
internal thoracic artery112
abdominal aorta artery1
circle of Willis1
primary cell
Afferent / Efferent Arteriole Endothelial Cell32
fibroblast of pulmonary artery1211
pulmonary artery endothelial cell1111
smooth muscle cell of the coronary artery111
endothelial cell of coronary artery11
cell line
smooth muscle cell of the coronary artery1111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego