Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 51candidate regulatory elements
  • 48histone modifications
  • 42accessible chromatin
  • 36Fine-mapped variants
  • 29eQTL
  • 19gene expression
  • 18variant allelic effects
  • 16binding sites
  • 16target gene predictions
  • 12chromatin state
Date released
  • September, 2022
  • 110February, 2021
  • 38March, 2020
  • 29January, 2020
  • 21June, 2020
  • 19May, 2020
  • 18February, 2020
  • 18January, 2022
  • 11May, 2021
  • 6August, 2017
  • 6October, 2022
  • 4May, 2019
  • 3September, 2023
  • 1February, 2024
  • 1February, 2025
  • 1March, 2024
  • 1November, 2019
Available data
  • 206bed bed3+
  • 67tsv
  • 21bigWig
  • 6bed bed9
  • 6bigBed bed9
Organism
  • 286Homo sapiens
Collection Tags
  • 79ChIP-Atlas
  • 62ENCODE
  • 61GTEx
  • 33DGA
  • 17T1D
  • 17T2D
  • 17eQTLCatalogue
  • 5AMP
Biosample type
  • 215tissue
  • 44cell line
  • 23primary cell
  • 4in vitro differentiated cells
  • 1stem cell
Organ
  • 2838vasculature
  • 2788blood vessel
  • 2784bodily fluid
  • 2779blood
  • 2652vein
  • 807epithelium
  • 427kidney
  • 360connective tissue
  • 287brain
  • 233pancreas
  • 176musculature of body
  • 149heart
  • 134embryo
  • 125intestine
  • 117liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 76large intestine
  • 75adipose tissue
  • 71uterus
  • 58artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 287AMP
Genome assembly (visualization)
  • 243hg19
  • 92GRCh38
month_released!
  • September, 2022
BIOSAMPLE
TYPE

287 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
variant allelic effects
binding sites
target gene predictions
chromatin state
tissue
brain133221112
caudate nucleus21232111
putamen1123311
substantia nigra313311
cerebellum111322
cell line
pituitary stalk10
SK-N-MC1112
BE(2)-C112
SK-N-DZ211
SK-N-SH211
primary cell
cardiac fibroblast32
choroid plexus epithelial cell1111
astrocyte of the cerebellum111
astrocyte of the hippocampus111
brain pericyte111
in vitro differentiated cells
hippocampal neuron11
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
stem cell
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego