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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
50
gene expression
40
candidate regulatory elements
37
target gene predictions
27
binding sites
23
eQTL
23
histone modifications
16
variant allelic effects
14
differential activity
9
Fine-mapped variants
7
chromatin state
2
caQTL
2
pQTL
Date released
September, 2022
106
February, 2021
50
November, 2021
21
June, 2020
18
February, 2024
17
September, 2023
15
May, 2021
12
March, 2020
11
August, 2021
11
January, 2020
10
February, 2020
10
May, 2020
9
October, 2022
7
January, 2022
7
March, 2023
7
November, 2022
6
August, 2017
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
243
bed bed3+
70
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bed bed9
1
bigBed narrowPeak
Organism
339
Homo sapiens
Biosample type
189
primary cell
86
tissue
38
in vitro differentiated cells
25
cell line
1
stem cell
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
263
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
264
hg19
87
GRCh38
2
hg18
month_released!
September, 2022
organ_slims!
lung
penis
BIOSAMPLE
TYPE
339 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
chromatin state
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
9
osteoblast
5
2
1
1
3
2
pancreatic stellate cell
2
2
1
3
mesangial cell
2
5
+ See 41 more…
tissue
subcutaneous adipose tissue
2
5
2
6
1
1
3
1
adipose tissue
2
3
1
2
1
4
1
omental fat pad
2
2
3
2
3
spinal cord
1
7
1
1
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
in vitro differentiated cells
adipocyte
4
1
2
4
1
1
4
chondrocyte
5
mesenchymal stem cell
1
1
1
1
1
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
fibroblast of cardiac tissue
2
1
2
GM23248
1
1
1
1
spinal cord
1
2
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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