Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 89accessible chromatin
  • 63differential activity
  • 49gene expression
  • 43target gene predictions
  • 40candidate regulatory elements
  • 31binding sites
  • 25histone modifications
  • 21eQTL
  • 16variant allelic effects
  • 8chromatin state
  • 6Fine-mapped variants
  • 3caQTL
  • 2pQTL
  • 2sQTL
Date released
  • September, 2022
  • 109February, 2021
  • 51May, 2026
  • 50November, 2021
  • 20June, 2020
  • 17September, 2023
  • 16February, 2024
  • 16May, 2021
  • 12October, 2022
  • 11August, 2021
  • 10January, 2020
  • 10May, 2020
  • 9February, 2020
  • 9March, 2020
  • 7August, 2017
  • 7March, 2023
  • 7November, 2022
  • 6January, 2022
  • 5July, 2026
  • 3April, 2020
  • 3May, 2022
  • 3November, 2020
  • 2January, 2021
  • 2January, 2025
  • 2July, 2025
  • 2May, 2024
  • 2October, 2019
  • 2September, 2018
  • 1August, 2018
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Available data
  • 264bed bed3+
  • 64tsv
  • 55bigWig
  • 7txt
  • 2bigBed bed9
  • 2csv
  • 1bed bed3
  • 1bed bed9
  • 1bed narrowPeak
  • 1bigBed narrowPeak
Organism
  • 398Homo sapiens
Collection Tags
  • 70DGA
  • 68AMP
  • 67T2DKP
  • 65ChIP-Atlas
  • 60ENCODE
  • 51pyxis
  • 39 T2DKP
  • 15KPMP
  • 10CMDGA
  • 10GTEx
  • 9HPAP
  • 9T1D
  • 7T2D
  • 6eQTLCatalogue
  • 5ENCODE-rE2G
  • 1BLUEPRINT
Biosample type
  • 263primary cell
  • 72tissue
  • 40in vitro differentiated cells
  • 22cell line
  • 1stem cell
Organ
  • 3296blood
  • 2827vasculature
  • 2801blood vessel
  • 2778bodily fluid
  • 2653vein
  • 801epithelium
  • 723brain
  • 531kidney
  • 398connective tissue
  • 380heart
  • 275pancreas
  • 230lung
  • 194intestine
  • 194liver
  • 194skin of body
  • 182musculature of body
  • 134embryo
  • 134eye
  • 128large intestine
  • 118adipose tissue
  • 111muscle organ
  • 106limb
  • 81uterus
  • 75extraembryonic component
  • 71stomach
  • 67artery
  • 64bone element
  • 62mammary gland
  • 60__MARKER__
  • 60adrenal gland
  • 60thymus
  • 49placenta
  • 48prostate gland
  • 45spleen
  • 40gonad
  • 40small intestine
  • 38lymph node
  • 35thyroid gland
  • 34penis
  • 34ureter
  • 27esophagus
  • 25spinal cord
  • 20ovary
  • 19testis
  • 16nerve
  • 15lymphatic vessel
  • 15skeleton
  • 13pituitary gland
  • 10bone marrow
  • 10bronchus
  • 9breast
  • 9lymphoid tissue
  • 9mouth
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 1embryonic structure
  • 1gallbladder
  • 1nose
  • 1pericardium
Project
  • 320AMP
  • 50ENCODE
  • 15KPMP
  • 4ITG
  • 4community
  • 3LungMap
  • 2T1D
Genome assembly (visualization)
  • 267hg19
  • 88GRCh38
  • 2hg18
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
month_released!
  • September, 2022
BIOSAMPLE
TYPE

398 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
differential activity
gene expression
target gene predictions
candidate regulatory elements
binding sites
histone modifications
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
pQTL
sQTL
primary cell
fibroblast164126
pericyte cell109
osteoblast521132
foreskin fibroblast11542
adipocyte33111
tissue
subcutaneous adipose tissue2526113
adipose tissue2321141
omental fat pad222323
subcutaneous abdominal adipose tissue51
cartilage tissue122
in vitro differentiated cells
adipocyte4152114
mesenchymal stem cell12111
chondrocyte5
fibroblast11
Adipose SGBS cell line (adipocyte)1
cell line
fibroblast of cardiac tissue212
GM232481111
adipose tissue derived mesenchymal stem cell11
chondrocyte11
hepatic stellate cell11
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego