Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 253gene expression
  • 207accessible chromatin
  • 92differential activity
  • 73target gene predictions
  • 61candidate regulatory elements
  • 43binding sites
  • 41variant allelic effects
  • 27histone modifications
  • 5chromatin state
  • 3eQTL
  • 2caQTL
Date released
  • 196February, 2021
  • 155September, 2023
  • September, 2022
  • 127November, 2021
  • 76February, 2024
  • 38March, 2023
  • 34May, 2021
  • 25June, 2020
  • 23August, 2021
  • 20January, 2021
  • 15May, 2020
  • 15November, 2022
  • 14January, 2020
  • 12February, 2023
  • 9February, 2020
  • 9May, 2024
  • 7April, 2020
  • 6August, 2018
  • 6March, 2020
  • 6October, 2022
  • 5October, 2019
  • 3August, 2017
  • 2March, 2024
  • 2May, 2022
  • 1July, 2020
  • 1November, 2019
Available data
  • 454bed bed3+
  • 324tsv
  • 173bigWig
  • 78txt
  • 13bigBed narrowPeak
  • 6csv
  • 2bed bed9
  • 2bigBed bed9
Organism
  • 807Homo sapiens
Collection Tags
  • 200DGA
  • 156AMP
  • 155KPMP
  • 148T2DKP
  • 81ChIP-Atlas
  • 63ENCODE
  • 47 T2DKP
  • 44HPAP
  • 35T1D
  • 30CMDGA
  • 6FNIH_projects-heart
  • 3FNIH_projects-liver
  • 2GTEx
  • 1T2D
Biosample type
  • 695primary cell
  • 49tissue
  • 40cell line
  • 23in vitro differentiated cells
Organ
  • 2838vasculature
  • 2788blood vessel
  • 2784bodily fluid
  • 2779blood
  • 2652vein
  • 807epithelium
  • 427kidney
  • 360connective tissue
  • 287brain
  • 233pancreas
  • 176musculature of body
  • 149heart
  • 134embryo
  • 125intestine
  • 117liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 76large intestine
  • 75adipose tissue
  • 71uterus
  • 58artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 496AMP
  • 155KPMP
  • 127ENCODE
  • 20T1D
  • 7LungMap
  • 2community
Genome assembly (visualization)
  • 458hg19
  • 194GRCh38
month_released!
  • September, 2022
BIOSAMPLE
TYPE

807 results

search-icontable-tab-icon
Clear Filters
gene expression
accessible chromatin
differential activity
target gene predictions
candidate regulatory elements
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell9157322112
hepatocyte13821124
epithelial cell of proximal tubule161111
pancreatic ductal cell3633112
glomerular endothelial cell14211
tissue
pigmented layer of retina20
breast epithelium113
esophagus squamous epithelium14
kidney epithelium11
pancreatic ductal cell2
cell line
EndoC_BH188311
keratinocyte31
choroid plexus epithelial cell111
epithelial cell of prostate111
dermis lymphatic vessel endothelial cell11
in vitro differentiated cells
retinal pigment epithelial cell6
foreskin keratinocyte111
hepatocyte(AFP)3
mammary gland epithelial cell111
pancreatic ductal cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego