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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
candidate regulatory elements
15
accessible chromatin
14
binding sites
13
target gene predictions
12
histone modifications
3
chromatin state
3
eQTL
3
gene expression
1
variant allelic effects
Date released
September, 2022
75
February, 2021
12
June, 2020
7
May, 2021
6
November, 2021
4
February, 2024
3
August, 2017
3
January, 2022
3
March, 2024
1
March, 2020
1
October, 2022
Available data
109
bed bed3+
3
bigWig
3
tsv
Organism
115
Homo sapiens
Biosample type
57
tissue
48
cell line
10
primary cell
Organ
798
epithelium
427
kidney
340
connective tissue
285
brain
233
pancreas
191
vasculature
171
musculature of body
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
109
AMP
6
ENCODE
Genome assembly (visualization)
109
hg19
11
GRCh38
month_released!
September, 2022
organ_slims!
heart
BIOSAMPLE
TYPE
115 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
target gene predictions
histone modifications
chromatin state
eQTL
gene expression
variant allelic effects
tissue
large intestine
15
1
1
1
prostate gland
2
1
2
2
1
sigmoid colon
5
1
2
transverse colon
4
1
1
1
colonic mucosa
2
1
1
+ See 9 more…
cell line
LNCAP
2
1
1
1
1
HT-29
1
1
1
1
1
22Rv1
2
1
1
HCT-116 cell
1
2
1
PC-3
1
1
1
1
+ See 12 more…
primary cell
colon epithelial cell
3
3
epithelial cell of prostate
2
1
luminal epithelial cell of prostatic duct
1
See all biosamples
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