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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
target gene predictions
37
candidate regulatory elements
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
52
July, 2026
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
126
bed bed3+
3
bigWig
2
tsv
Organism
128
Homo sapiens
Collection Tags
52
ENCODE-rE2G
37
ENCODE
17
ChIP-Atlas
6
AMP
6
DGA
6
T2DKP
2
4DN
2
GTEx
2
T1D
2
T2D
2
eQTLCatalogue
1
EpiMap
Biosample type
76
tissue
46
cell line
6
primary cell
Organ
3296
blood
2827
vasculature
2801
blood vessel
2778
bodily fluid
2653
vein
801
epithelium
723
brain
531
kidney
398
connective tissue
380
heart
275
pancreas
230
lung
194
intestine
194
liver
194
skin of body
182
musculature of body
134
embryo
134
eye
128
large intestine
118
adipose tissue
111
muscle organ
106
limb
81
uterus
75
extraembryonic component
71
stomach
67
artery
64
bone element
62
mammary gland
60
__MARKER__
60
adrenal gland
60
thymus
49
placenta
48
prostate gland
45
spleen
40
gonad
40
small intestine
38
lymph node
35
thyroid gland
34
penis
34
ureter
27
esophagus
25
spinal cord
20
ovary
19
testis
16
nerve
15
lymphatic vessel
15
skeleton
13
pituitary gland
10
bone marrow
10
bronchus
9
breast
9
lymphoid tissue
9
mouth
7
urinary bladder
6
tongue
6
vagina
5
trachea
1
embryonic structure
1
gallbladder
1
nose
1
pericardium
Project
122
AMP
6
ENCODE
Genome assembly (visualization)
72
hg19
62
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
128 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
15
15
1
1
sigmoid colon
5
5
1
transverse colon
5
4
1
1
colonic mucosa
2
2
1
1
mucosa of descending colon
3
+ See 9 more…
cell line
HCT116
18
1
HT-29
2
1
1
1
1
RKO
1
1
1
1
1
SW480
1
1
1
1
1
Caco-2
3
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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