Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 63target gene predictions
  • 37candidate regulatory elements
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 3chromatin state
  • 2eQTL
  • 2gene expression
Date released
  • September, 2022
  • 52July, 2026
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 126bed bed3+
  • 3bigWig
  • 2tsv
Organism
  • 128Homo sapiens
Collection Tags
  • 52ENCODE-rE2G
  • 37ENCODE
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
  • 1EpiMap
Biosample type
  • 76tissue
  • 46cell line
  • 6primary cell
Organ
  • 3296blood
  • 2827vasculature
  • 2801blood vessel
  • 2778bodily fluid
  • 2653vein
  • 801epithelium
  • 723brain
  • 531kidney
  • 398connective tissue
  • 380heart
  • 275pancreas
  • 230lung
  • 194intestine
  • 194liver
  • 194skin of body
  • 182musculature of body
  • 134embryo
  • 134eye
  • 128large intestine
  • 118adipose tissue
  • 111muscle organ
  • 106limb
  • 81uterus
  • 75extraembryonic component
  • 71stomach
  • 67artery
  • 64bone element
  • 62mammary gland
  • 60__MARKER__
  • 60adrenal gland
  • 60thymus
  • 49placenta
  • 48prostate gland
  • 45spleen
  • 40gonad
  • 40small intestine
  • 38lymph node
  • 35thyroid gland
  • 34penis
  • 34ureter
  • 27esophagus
  • 25spinal cord
  • 20ovary
  • 19testis
  • 16nerve
  • 15lymphatic vessel
  • 15skeleton
  • 13pituitary gland
  • 10bone marrow
  • 10bronchus
  • 9breast
  • 9lymphoid tissue
  • 9mouth
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 1embryonic structure
  • 1gallbladder
  • 1nose
  • 1pericardium
Project
  • 122AMP
  • 6ENCODE
Genome assembly (visualization)
  • 72hg19
  • 62GRCh38
month_released!
  • September, 2022
BIOSAMPLE
TYPE

128 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine151511
sigmoid colon551
transverse colon5411
colonic mucosa2211
mucosa of descending colon3
cell line
HCT116181
HT-2921111
RKO11111
SW48011111
Caco-231
primary cell
colon epithelial cell33
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego