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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 79candidate regulatory elements
  • 31accessible chromatin
  • 13eQTL
  • 13gene expression
  • 13target gene predictions
  • 7Fine-mapped variants
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6caQTL
  • 6chromatin state
  • 4differential activity
Date released
  • September, 2022
  • 92February, 2021
  • 15February, 2024
  • 12July, 2025
  • 11November, 2021
  • 9March, 2020
  • 6February, 2020
  • 6June, 2020
  • 6May, 2021
  • 5January, 2020
  • 5March, 2025
  • 5May, 2020
  • 5October, 2025
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 148bed bed3+
  • 27tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bed bed9
  • 3bigBed bed9
Organism
  • 193Homo sapiens
Collection Tags
  • 79ENCODE
  • 32DGA
  • 30 T2DKP
  • 19ChIP-Atlas
  • 18T2DKP
  • 13AMP
  • 12GTEx
  • 11STARNET
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 127tissue
  • 56primary cell
  • 8cell line
  • 2in vitro differentiated cells
Organ
  • 2843vasculature
  • 2793blood vessel
  • 2784bodily fluid
  • 2779blood
  • 2652vein
  • 810epithelium
  • 427kidney
  • 367connective tissue
  • 287brain
  • 233pancreas
  • 193musculature of body
  • 149heart
  • 134embryo
  • 125intestine
  • 122liver
  • 106limb
  • 102skin of body
  • 101lung
  • 82eye
  • 80adipose tissue
  • 76large intestine
  • 71uterus
  • 63artery
  • 50stomach
  • 47bone element
  • 47extraembryonic component
  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
  • 25ureter
  • 24esophagus
  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
  • 16spleen
  • 16thymus
  • 14testis
  • 13pituitary gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 9lymphoid tissue
  • 9skeleton
  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
  • 1pericardium
Project
  • 182AMP
  • 11ENCODE
Genome assembly (visualization)
  • 163hg19
  • 33GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
month_released!
  • September, 2022
BIOSAMPLE
TYPE

193 results

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Clear Filters
candidate regulatory elements
accessible chromatin
eQTL
gene expression
target gene predictions
Fine-mapped variants
binding sites
histone modifications
variant allelic effects
caQTL
chromatin state
differential activity
tissue
muscle of arm1711
muscle of leg14212
muscle of back15
skeletal muscle1221114
psoas muscle314
primary cell
skeletal muscle satellite cell1612111
skeletal muscle fiber522
type I muscle cell31111
type II muscle cell31111
myotube21
cell line
LHCN-M21111
A67311
SJCRH3011
in vitro differentiated cells
myotube11
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