Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 83target gene predictions
  • 41candidate regulatory elements
  • 32accessible chromatin
  • 18binding sites
  • 13histone modifications
  • 3eQTL
  • 2gene expression
  • 1chromatin state
  • 1variant allelic effects
Date released
  • September, 2022
  • 92July, 2026
  • 68February, 2021
  • 10November, 2021
  • 8June, 2020
  • 5May, 2021
  • 4October, 2022
  • 3January, 2022
  • 2March, 2024
  • 1August, 2017
  • 1February, 2024
Available data
  • 192bed bed3+
  • 5bigWig
  • 2tsv
Organism
  • 194Homo sapiens
Collection Tags
  • 54ENCODE-rE2G
  • 45ENCODE
  • 38HDMA
  • 35ChIP-Atlas
  • 10AMP
  • 10T2DKP
  • 6DGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2GTEx
Biosample type
  • 120primary cell
  • 44cell line
  • 21tissue
  • 9in vitro differentiated cells
Organ
  • 3296blood
  • 2827vasculature
  • 2801blood vessel
  • 2778bodily fluid
  • 2653vein
  • 801epithelium
  • 723brain
  • 531kidney
  • 398connective tissue
  • 380heart
  • 275pancreas
  • 230lung
  • 194intestine
  • 194liver
  • 194skin of body
  • 182musculature of body
  • 134embryo
  • 134eye
  • 128large intestine
  • 118adipose tissue
  • 111muscle organ
  • 106limb
  • 81uterus
  • 75extraembryonic component
  • 71stomach
  • 67artery
  • 64bone element
  • 62mammary gland
  • 60__MARKER__
  • 60adrenal gland
  • 60thymus
  • 49placenta
  • 48prostate gland
  • 45spleen
  • 40gonad
  • 40small intestine
  • 38lymph node
  • 35thyroid gland
  • 34penis
  • 34ureter
  • 27esophagus
  • 25spinal cord
  • 20ovary
  • 19testis
  • 16nerve
  • 15lymphatic vessel
  • 15skeleton
  • 13pituitary gland
  • 10bone marrow
  • 10bronchus
  • 9breast
  • 9lymphoid tissue
  • 9mouth
  • 7urinary bladder
  • 6tongue
  • 6vagina
  • 5trachea
  • 1embryonic structure
  • 1gallbladder
  • 1nose
  • 1pericardium
Project
  • 184AMP
  • 10ENCODE
Genome assembly (visualization)
  • 105GRCh38
  • 97hg19
month_released!
  • September, 2022
BIOSAMPLE
TYPE

194 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
chromatin state
variant allelic effects
primary cell
foreskin fibroblast55142
keratinocyte7141211
fibroblast66
foreskin keratinocyte27
dermis blood vessel endothelial cell44
cell line
GM232481111
keratinocyte31
RPMI7951111
SK-MEL-5111
BJ11
tissue
lower leg skin24
suprapubic skin23
skin of body13
skin of forearm11
skin of prepuce of penis11
in vitro differentiated cells
foreskin keratinocyte111
iPS DF 4.7 Cell Line111
dermis microvascular lymphatic vessel endothelial cell11
skin fibroblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego