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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 2184target gene predictions
  • 877candidate regulatory elements
  • 685gene expression
  • 484differential activity
  • 397accessible chromatin
  • 180eQTL
  • 141variant allelic effects
  • 111chromatin state
  • 93binding sites
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • September, 2022
  • 1984July, 2026
  • 1021February, 2021
  • 320May, 2026
  • 319February, 2024
  • 286September, 2023
  • 243May, 2021
  • 155May, 2020
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3869bed bed3+
  • 3551tsv
  • 112txt
  • 89bigWig
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 6bigBed narrowPeak
  • 1bam
Organism
  • 7858Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 572DGA
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 262AMP
  • 252T1D
  • 1744DN
  • 151GTEx
  • 148T2DKP
  • 140 T2DKP
  • 133CATlas
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 1EpiMap
Biosample type
  • 4261tissue
  • 2730primary cell
  • 701cell line
  • 208in vitro differentiated cells
  • 4stem cell
Organ
  • 3234blood
  • 2773vasculature
  • 2761blood vessel
  • 2714bodily fluid
  • 2649vein
  • 625brain
  • 536epithelium
  • 473kidney
  • 343heart
  • 267connective tissue
  • 209lung
  • 206pancreas
  • 160intestine
  • 154skin of body
  • 149liver
  • 138musculature of body
  • 111muscle organ
  • 108adipose tissue
  • 108large intestine
  • 99embryo
  • 82limb
  • 73uterus
  • 67eye
  • 62stomach
  • 60__MARKER__
  • 59extraembryonic component
  • 56thymus
  • 53adrenal gland
  • 49artery
  • 42spleen
  • 41mammary gland
  • 40placenta
  • 37small intestine
  • 36bone element
  • 33thyroid gland
  • 32gonad
  • 30ureter
  • 28prostate gland
  • 23esophagus
  • 22spinal cord
  • 21penis
  • 18ovary
  • 16lymph node
  • 14testis
  • 13nerve
  • 12pituitary gland
  • 9lymphatic vessel
  • 8breast
  • 8mouth
  • 7skeleton
  • 6lymphoid tissue
  • 6urinary bladder
  • 6vagina
  • 5bronchus
  • 5tongue
  • 4bone marrow
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 7441AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 2566GRCh38
  • 1966hg19
  • 4hg18
month_released!
  • September, 2022
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

7906 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
candidate regulatory elements
gene expression
differential activity
accessible chromatin
eQTL
variant allelic effects
chromatin state
binding sites
Fine-mapped variants
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
head of caudate nucleus86
dorsolateral prefrontal cortex5711
posterior cingulate gyrus48
heart19184122
primary cell
fibroblast2831024261
endothelial cell1739258223
T-cell644
CD4-positive, alpha-beta T cell5283
macrophage13321710832
cell line
HeLa-S35621
H1-hESC3881
K56224111
H9146
HFFc620
in vitro differentiated cells
hematopoietic multipotent progenitor cell1291
adipocyte5214
cardiomyocytes11
neural progenitor cell217
progenitor cell of endocrine pancreas19
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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