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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
217
accessible chromatin
167
gene expression
134
target gene predictions
122
candidate regulatory elements
71
chromatin state
47
binding sites
45
variant allelic effects
31
differential activity
31
histone modifications
9
Fine-mapped variants
9
eQTL
5
caQTL
Date released
215
February, 2021
187
September, 2022
September, 2023
118
November, 2021
75
February, 2024
38
March, 2023
36
May, 2021
27
June, 2020
24
August, 2021
22
May, 2020
21
January, 2020
20
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
7
April, 2020
7
October, 2019
7
October, 2022
6
August, 2018
4
November, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
600
bed bed3+
188
tsv
180
bigWig
78
txt
68
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
888
Homo sapiens
Biosample type
670
primary cell
145
tissue
47
cell line
26
in vitro differentiated cells
Organ
794
epithelium
512
kidney
463
brain
443
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
255
heart
244
limb
231
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
184
blood vessel
174
large intestine
156
liver
146
extraembryonic component
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
741
AMP
118
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
680
hg19
269
GRCh38
month_released!
September, 2023
organ_slims!
skeleton
stomach
BIOSAMPLE
TYPE
888 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
15
9
7
2
2
1
1
2
hepatocyte
8
13
3
1
1
1
2
4
epithelial cell of proximal tubule
1
16
1
2
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 114 more…
tissue
coronary artery
3
1
3
3
3
2
3
2
1
pigmented layer of retina
20
tibial artery
3
1
2
3
3
2
3
2
ascending aorta
1
1
2
4
3
1
3
1
aorta
1
4
4
4
+ See 24 more…
cell line
EndoC_BH1
8
8
1
1
3
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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