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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
accessible chromatin
190
candidate regulatory elements
168
target gene predictions
165
gene expression
100
chromatin state
49
variant allelic effects
45
binding sites
30
differential activity
30
histone modifications
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
280
September, 2022
247
February, 2021
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
25
May, 2020
23
August, 2021
21
January, 2020
20
January, 2021
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
3
November, 2019
2
January, 2022
2
May, 2019
2
May, 2022
1
July, 2020
Available data
709
bed bed3+
186
tsv
184
bigWig
97
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1022
Homo sapiens
Biosample type
665
primary cell
281
tissue
50
cell line
26
in vitro differentiated cells
Organ
794
epithelium
512
kidney
463
brain
443
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
255
heart
244
limb
231
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
184
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
866
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
821
hg19
303
GRCh38
month_released!
September, 2023
organ_slims!
skeleton
tongue
BIOSAMPLE
TYPE
1022 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
variant allelic effects
binding sites
differential activity
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
15
7
9
2
2
1
1
2
hepatocyte
8
1
3
13
1
2
1
4
epithelial cell of proximal tubule
1
2
1
16
1
1
1
glomerular endothelial cell
2
2
1
14
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 116 more…
tissue
muscle of arm
1
33
16
16
1
muscle of leg
2
27
14
15
tibial nerve
3
6
3
2
4
2
3
2
pigmented layer of retina
20
tibial artery
3
3
2
1
3
2
3
2
+ See 29 more…
cell line
EndoC_BH1
8
1
8
1
3
GM23248
1
2
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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