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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
49
single cell RNA-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
57
DNA binding
53
Transcription
2
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
narrow histone mark
19
control
6
transcription factor
5
nucleotide modification
4
RNA binding protein
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
112
bam
96
bigWig
53
tsv
44
bed narrowPeak
44
fastq
43
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
122
Homo sapiens
Biosample type
67
tissue
49
primary cell
6
cell line
Organ
49
pancreas
42
heart
39
epithelium
15
kidney
8
connective tissue
Project
122
AMP
Genome assembly (visualization)
97
GRCh38
97
hg19
Lab
112
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
single cell RNA-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
26
kidney
15
islet of Langerhans
6
4
heart right ventricle
9
heart
7
primary cell
pancreatic delta cell
7
osteoblast
4
1
1
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
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cell line
EndoC_BH1
6
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