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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
25
single cell RNA-seq
10
snATAC-seq
Assay category
74
DNA binding
25
Transcription
10
DNA accessibility
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
683
February, 2021
382
August, 2017
373
May, 2021
341
May, 2020
315
November, 2017
313
August, 2021
193
October, 2019
170
June, 2019
152
February, 2023
135
July, 2018
120
May, 2022
87
May, 2019
86
November, 2018
80
April, 2019
79
July, 2019
75
December, 2017
74
October, 2018
56
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
13
February, 2020
12
September, 2018
10
November, 2020
8
January, 2018
7
October, 2017
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
90
bam
73
fastq
61
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
16
tsv
Organism
108
Homo sapiens
Biosample type
99
tissue
10
primary cell
Organ
92
pancreas
epithelium
25
connective tissue
23
adipose tissue
19
lung
Project
90
AMP
19
LungMap
Genome assembly (visualization)
61
GRCh38
61
hg19
Lab
90
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
1
inconsistent control read length
organ_slims!
brain
epithelium
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
single cell RNA-seq
snATAC-seq
tissue
body of pancreas
33
lung
9
10
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
+ See 2 more…
primary cell
mesenchymal cell
5
pancreatic cell
3
pancreatic stellate cell
2
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