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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
34
ChIP-seq
1
Hi-C
Assay category
49
Transcription
34
DNA binding
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
83
bam
79
bigWig
79
fastq
49
tsv
30
bed narrowPeak
30
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
43
primary cell
28
cell line
13
tissue
Organ
39
pancreas
33
epithelium
27
blood
27
bodily fluid
7
spleen
2
connective tissue
1
liver
Project
84
AMP
Genome assembly (visualization)
79
GRCh38
79
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
April, 2019
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
84 results
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single cell RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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cell line
GM12878
27
HepG2
1
tissue
spleen
7
islet of Langerhans
6
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