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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
single cell RNA-seq
57
ATAC-seq
41
WGBS
22
snATAC-seq
6
total RNA-seq
Assay category
89
Transcription
79
DNA accessibility
41
DNA methylation
Date released
712
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
zippedFastqFolder
73
bam
68
fastq
49
bigWig
49
tsv
18
bed narrowPeak
7
txt
1
bed bed3+
Organism
209
Homo sapiens
Biosample type
177
primary cell
32
tissue
Organ
143
pancreas
113
epithelium
liver
2
connective tissue
2
musculature of body
Project
134
HPAP
75
AMP
Genome assembly (visualization)
68
hg19
49
GRCh38
Lab
134
Klaus Kaestner, Upenn
51
AMP-T2D consortium
24
Kyle Gaulton, UCSD
Audit category:
1
audit script error
month_released!
November, 2019
organ_slims!
liver
BIOSAMPLE
ASSAY
209 results
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single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
3
22
25
pancreatic beta cell
3
13
16
pancreatic acinar cell
6
4
pancreatic delta cell
7
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tissue
islet of Langerhans
6
18
6
skeletal muscle tissue
1
1
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