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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
80
ChIP-seq
51
single cell RNA-seq
1
pCHi-C
Assay category
196
Transcription
80
DNA binding
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
246
bam
232
bigWig
192
tsv
65
bed narrowPeak
64
bigBed narrowPeak
54
fastq
1
bedpe bed3+
Organism
277
Homo sapiens
Biosample type
225
tissue
51
primary cell
1
in vitro differentiated cells
Organ
161
pancreas
60
heart
36
epithelium
23
kidney
12
brain
5
connective tissue
3
adipose tissue
3
blood vessel
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
277
AMP
Genome assembly (visualization)
232
hg19
231
GRCh38
Lab
277
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
277 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
pCHi-C
tissue
islet of Langerhans
120
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
+ See 25 more…
primary cell
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic acinar cell
6
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
in vitro differentiated cells
white fat cell
1
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