Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
25
total RNA-seq
4
Hi-C
1
MPRA
Assay category
114
DNA binding
25
Transcription
4
3D chromatin structure
Target of assay
60
histone
60
histone modification
37
broad histone mark
34
transcription factor
23
narrow histone mark
18
control
6
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
113
bam
95
bed narrowPeak
95
bigWig
94
bigBed narrowPeak
35
fastq
25
tsv
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
143
Homo sapiens
Biosample type
112
tissue
29
cell line
3
primary cell
Organ
60
heart
27
blood
27
bodily fluid
23
kidney
12
brain
7
spleen
4
pancreas
3
blood vessel
3
epithelium
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
liver
2
musculature of body
1
eye
1
nerve
1
spinal cord
Project
141
AMP
3
HPAP
Genome assembly (visualization)
98
hg19
94
GRCh38
Lab
141
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
1
inconsistent control
1
inconsistent ontology term
month_released!
February, 2018
BIOSAMPLE
ASSAY
144 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
MPRA
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
spleen
7
+ See 25 more…
cell line
GM12878
27
HepG2
1
MIN6
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
See all biosamples
Download